Well, taking some things into consideration...
It's a bit tough to group Sapphire/Ruby and Emerald, and Diamond/Pearl and Platinum together, considering their post-games were very different. RS/DP had only the battle tower (As the main feature/goal of course) and Emerald/Platinum had the entire Battle Frontier.
Also, it would be good to include FR/LG because it added a whole new aspect to the post-game, (And partly in the story line) the Sevii Islands... You might say the same for HG/SS, but it was basically the same as GSC except for the Battle Frontier...
Sorry to be picky, but it's just some food for thought...
Anyway, I'd have to go with Black and White. Don't get me wrong, it's a pretty nice post-game with plenty to do... But it didn't have any goal or special appeal to it...
And honestly, I'm sure we could get into the post-game towns without fighting the Pokemon League if we just had some Hot Tea...
Like RedCharizard said, you have to account for the lack of technological capabilities back then. There honestly wasn't much room for a lot of post-game content, unless you'd rather be playing the game on a disc with a controller.
Gold Silver and Crystal had the best post-game in my opinion, because it let you visit an entire other region! That was simply brilliant.
Sapphire and Ruby had the Sky Pillar and the Battle Tower, which at least gave you some reason to keep playing after you beat the Champion, and Emerald had the entire Battle Frontier! (Major breakthrough if you ask me)
Diamond and Pearl had several new areas to explore, those being Snowpoint Temple, Turnback Cave, and the 3 Areas. There was the battle tower and the whole little island area was really cool and unique, along with being able to re-battle gym leaders and capture Heatran on Stark Mountian. Platinum improved the Battle Frontier.
Black and White was great too, but not nearly as engaging or exciting as the other post-games... And once again- Hot. Tea.
~AZX